Insertion junction: CLIP2.020886_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020886
Chromosome:chromosome 6
Location:1099766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g257600 FA1 (1 of 4) PF13516 - Leucine Rich repeat (LRR_6); Flagellar Autonomy Protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAACCGCCACTGGTGCCGGCCGCCGCTGACCTGGCAGCGCAGCAGAA
Internal bar code:ATTTCCGCCAGTAGCCGAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1613
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTGACTTGGACACGGA
Suggested primer 2:CTTGACAGGGCTGTAGAGGC