Insertion junction: CLIP2.020888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020888
Chromosome:chromosome 3
Location:2283280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157650 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTCCACACACACCGCGTGTGCACCTAAACCGTTTCCCACCACCCCCTG
Internal bar code:CACTTATCTGGCTAGGATGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3142
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTCCTGTGTTGCCTTCT
Suggested primer 2:GGCATAGGAGCTGGGGTTTT