Insertion junction: CLIP2.020888_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020888
Chromosome:chromosome 3
Location:2283284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157650 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCTGCAGCGTGATCTGGGAAGGTTTGGGTGTTGGCCTGATTGCATTT
Internal bar code:CACTTATCTGGCTAGGATGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATAGGAGCTGGGGTTTT
Suggested primer 2:CGTCTCCTGTGTTGCCTTCT