Insertion junction: CLIP2.020894_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020894
Chromosome:chromosome 1
Location:583411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003500 CLUB1,MSH2 (1 of 1) IPR017987 - Wilm's tumour protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACCTCCCTTGGCCCCGGATCCATCGCCGACGTGCGGGCGGCTGTAGC
Internal bar code:GACCTCCACTGGATGAGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCCTTGACAATCCCCC
Suggested primer 2:TTCACGTGTGCTCCCTTACC