Insertion junction: CLIP2.020899_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020899
Chromosome:chromosome 1
Location:1479805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007901 (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron
Cre01.g800026 (1 of 2) K02937 - large subunit ribosomal protein L7e (RP-L7e, RPL7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGGGTTATTCAGCTGTGGGCTGACCACATCTGGCTCGCCATTTTCTA
Internal bar code:AACAGTGCTGAGCGGCGTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1034
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCACACACTCCCACATAC
Suggested primer 2:AGACGCGTTGTTACCGATGT