Insertion junction: CLIP2.020901_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020901
Chromosome:chromosome 3
Location:6799073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197100 LRL1 Lipid remodeling regulator 1; (1 of 2) PTHR10641:SF585 - MYB DNA-BINDING-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGGGTGGAGGCTGCGATAGCGGCCGCCGGGTCGGGCGCGGCGGCAAA
Internal bar code:AAAAGAGAGTGTAAGTGTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1681
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCAGACATCAAGAAGGT
Suggested primer 2:GCTCTTTAGCCCCTTACGCA