Insertion junction: CLIP2.020903_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020903
Chromosome:chromosome 12
Location:3851238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515050 HLM18,SET4 putative N-methyltransferase; (1 of 1) PTHR13793:SF5 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX4-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACACGAACGCCTGCTTGCCGCTACGCAGCTGCTGCACAGGCGCAGTGC
Internal bar code:TGGTTTGGGCTATATGAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:48
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTCACGGCATCAGGAGT
Suggested primer 2:CTCGTCTTCACTGTCGCTGT