Insertion junction: CLIP2.020909_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020909
Chromosome:chromosome 1
Location:4593690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031700 FKM1 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCTGGTATTTACAACCCCTCCCCGGCTGCTCCCTGCTGCACTCACT
Internal bar code:ACCTGTTGACTACGCAGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGAACTTTCCTCGCCCC
Suggested primer 2:GAGGCGTGTGAAGGGAAGAA