Insertion junction: CLIP2.020909_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020909
Chromosome:chromosome 1
Location:4593695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031700 FKM1 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAAGTAAACCAAAACCAACGAAAACTGGAGTGCAGGCAGCAGGGGGG
Internal bar code:TAGCATTCAATTGGGGCTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:7.40741
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGTGTGAAGGGAAGAA
Suggested primer 2:TCATGAACTTTCCTCGCCCC