Insertion junction: CLIP2.020918_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020918
Chromosome:chromosome 3
Location:1969397
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155527 (1 of 1) IPR027363 - Methylthioribose-1-phosphate isomerase-like, N-terminal domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACAAGCTGCAGCTAAGTATCTTCCGGATACGCAGGGACAACTACAAC
Internal bar code:GTTCAAAGGAGGGTTCGTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1188
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAGAGTGGACCCGTTAA
Suggested primer 2:GGCGGATAATGACCCATCGT