Insertion junction: CLIP2.020929_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020929
Chromosome:chromosome 12
Location:5272830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527950 (1 of 1) 2.4.1.227 - Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase / Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGCCTGCGCCCGCCGCTTCTCCGCCGCCGCACGCGACTTGGCGTCGC
Internal bar code:TTGCGGCGCAAGAAAGGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1833
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGGTGTATGAGCCCAA
Suggested primer 2:GACAACCCCAGGATCCCTTG