Insertion junction: CLIP2.020931_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020931
Chromosome:chromosome 14
Location:2122839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621700 MMP31 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCCAACACTGGCCCGGAGCCGAGTCAGGGCAGCGCCAAGTCACCGCC
Internal bar code:TAGATGGCCCCGCTATCCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1091
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCAACACTAGGCAAAAA
Suggested primer 2:ACCTACGTCACGCTCTACCT