Insertion junction: CLIP2.020933_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020933
Chromosome:chromosome 12
Location:7950212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552850 CGL77 (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGGGAGGCCACGAGGCCAGATTACCATGATCACCGGGAAAGCGCAGG
Internal bar code:CCAAAGGGGCCCAGTGCCTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1898
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AACCATCTTGGCATCCCCAG
Suggested primer 2:GAGTATGCTCTGCGCTACGT