Insertion junction: CLIP2.020937_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020937
Chromosome:chromosome 16
Location:5007508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686202 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAAACACATACACATAAACACACACACGCACGCACACACACACACACA
Internal bar code:ACCACGTGGGCGGGGAGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1267
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCTGTCACTGTTACTGT
Suggested primer 2:ATAGCTTGCTATGGGCGCAA