| Insertion cassette: | CIB2 |
| Side of cassette: | 5' |
| Strand: | - |
| Strain: | CLIP2.020942 |
| Chromosome: | chromosome 15 |
| Location: | 5358149 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre17.g734300 | AGI1 | (1 of 2) PTHR10903//PTHR10903:SF47 - GTPASE, IMAP FAMILY MEMBER-RELATED // TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-RELATED; Putative Avirulence-Induced Gene AGI1 | CDS |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | CCCTGCAACGGTAACGCAGGACCAACACACCAGGCAATGCGGAGGTGTCA |
| Internal bar code: | ACGGGAATCGAGGCATTAAATT |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 1720 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 34 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 34 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | GCATGGCGTTCGACTTCATC |
| Suggested primer 2: | CGTGTACTGATGCTGCATGC |