Insertion junction: CLIP2.020948_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020948
Chromosome:chromosome 10
Location:1464910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428400 PUS7 (1 of 2) 5.4.99.24 - 23S rRNA pseudouridine(955/2504/2580) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCTCCATTCCTGACCTCTTCCCCCGCATTGGCTCTGGCACTGCACCC
Internal bar code:GGAGATTGTATAGAGTGTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3106
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGACGCATCTGCAGGTG
Suggested primer 2:CGACGTGTATCGGTATGCGA