Insertion junction: CLIP2.020949_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020949
Chromosome:chromosome 16
Location:6169758
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677000 HSP70E,GEX27 (1 of 1) K09489 - heat shock 70kDa protein 4 (HSPA4); Heat shock protein 70E intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTCGTGGCGCGCGGGCGGAAAGGACGGGGGCCCTGGGTTGCGTGAGC
Internal bar code:AGGGCGCGTCATCCGGGCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1123
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAGATGCCTAGTGCCCAGAG
Suggested primer 2:GTGAAGTGCCCAAACGACAC