Insertion junction: CLIP2.020952_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020952
Chromosome:chromosome 12
Location:5490320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530000 (1 of 11) 2.7.11.24 - Mitogen-activated protein kinase / Stress-activated protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGCTCTGCTGGCGTGCAGGTCGCCCTGAAGCGCGTTGGGGACGTGTT
Internal bar code:TTCAGTTTTCCTGTGTCTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCAGCTACCTTGACTTT
Suggested primer 2:GCAGGAATCGCGGATTTCAC