Insertion junction: CLIP2.020981_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020981
Chromosome:chromosome 13
Location:570029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGGGCAGCTGACATATATGGCACATACAGGCCGGCGGCTGGGTCTG
Internal bar code:GAGAAGCCTAATTTGCTCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1544
LEAP-Seq percent confirming:24.2424
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCCTCCTCGAACCTGGC
Suggested primer 2:GCTATGGAAGAAAGCGCTGC