Insertion junction: CLIP2.020981_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020981
Chromosome:chromosome 13
Location:570031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCACGCAAGCGCACAAGAACGAAGCTGGGGCCTGTGCCCATGCATGCT
Internal bar code:GAGAAGCCTAATTTGCTCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1520
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATGGAAGAAAGCGCTGC
Suggested primer 2:TTTTCCTCCTCGAACCTGGC