Insertion junction: CLIP2.020984_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020984
Chromosome:chromosome 17
Location:3186848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721150 CDS
lncRNA_TCONS_00163097 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATCGCCCTGGTGTGCAAGGACGACAACGGGTTGGTGTGCGTCGGGGA
Internal bar code:CTGTAGACTCACAGTTGTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2793
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGGTTGTGCTCCATAGG
Suggested primer 2:ACACTCTTTCTACAGCCGCC