Insertion junction: CLIP2.020985_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020985
Chromosome:chromosome 12
Location:4566303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521550 (1 of 1) PF00630//PF02493 - Filamin/ABP280 repeat (Filamin) // MORN repeat (MORN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGAGGCACAGCCGCACAGGGGCCAGCGCATCGAGTGGGTCCTGGGAGT
Internal bar code:CGGTCTTAAACGGTAGCGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2390
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACAATGCTTATGCGAGG
Suggested primer 2:CTCAGCCGTGTGGAAGTCAT