Insertion junction: CLIP2.020996_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020996
Chromosome:chromosome 3
Location:5703654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186850 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAACATATGATGAGGAGAGGGGCGCGGGGCGGCAGAAGGCGTGTCTCC
Internal bar code:TCGATTTTGTTGTGTAAGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTTCTTGTCGCCCCTAC
Suggested primer 2:GAGGGGTGTGCTTAAGGGTC