Insertion junction: CLIP2.021000_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021000
Chromosome:chromosome 13
Location:3181522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585100 (1 of 2) IPR002014//IPR008942 - VHS domain // ENTH/VHS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACATGCCTTCTCCGCGAGTCGCTCCGTTGACGCCCTCCAGCAGCTTA
Internal bar code:CTCGAATTGGTCTCAGGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:78
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTCAAGGACGTTGTGGC
Suggested primer 2:TATGAAAGGCCCTGTGCTGG