Insertion junction: CLIP2.021005_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021005
Chromosome:chromosome 10
Location:2788642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438500 CPK3,MOT54,FAP264 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 264 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCTGCGGCTGGCCGACAACGCCATCCCGGACGAGGGCGTGGCGGAGC
Internal bar code:GGGTAAGGGTGGTGCAATTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2908
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGAGGTGTTGTTCTCCAG
Suggested primer 2:CTTGAAGGGCCCAACATTGC