Insertion junction: CLIP2.021028_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021028
Chromosome:chromosome 3
Location:6411081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192850 (1 of 1) 2.3.1.193 - tRNA(Met) cytidine acetyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACTGGCAGAAGCGTGCGTCCGTGTGCGTGGTGGGACGGTTCTGCACG
Internal bar code:TGTTGTAGGCGTAACAATAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1743
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACAACAAGTCGTGCCC
Suggested primer 2:ACGGGGTGACTTATGCAAGG