Insertion junction: CLIP2.021049_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021049
Chromosome:chromosome 3
Location:8614683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAACAGGCCGCGCTGTCGGCAACCTGCAGCCGCCTCAGGCCGCAGAGT
Internal bar code:AATGGGCGGAGTACAGAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3884
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAGCAAACACGAAGCAA
Suggested primer 2:ACCCTCGTCAGTGAAACGTC