Insertion junction: CLIP2.021053_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021053
Chromosome:chromosome 9
Location:5509751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCAGGGCCCATTTTAAGATCGGAGGCATGAAGACGCGGCCCCACAAC
Internal bar code:CAGAGTGGATCCTGTACCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3404
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTGGATGAAATGGGCAT
Suggested primer 2:TACGCACGGTCTACATGTCG