Insertion junction: CLIP2.021053_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021053
Chromosome:chromosome 9
Location:5509752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTCTGGGACACGTATGGCGACGTCGTGGCTTCCCAAACGGAGGACCC
Internal bar code:CCTATGTCTTTAGTAGGTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3513
LEAP-Seq percent confirming:91.7808
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCACGGTCTACATGTCG
Suggested primer 2:TGGCTGGATGAAATGGGCAT