Insertion junction: CLIP2.021060_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021060
Chromosome:chromosome 13
Location:3765988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588750 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTAGGTGTGTATTGTAGGGAGGAAGGCTAGGCCGGAAGGCGGCGCGG
Internal bar code:TTCGTCAAGTTGTTGTATAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1140
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGACTGCTGCTGATCTT
Suggested primer 2:GGGTGTGTCGAGGTCTCTTG