Insertion junction: CLIP2.021062_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.021062
Chromosome:chromosome 13
Location:3026049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801543 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGAAGCAGCTGCAGGTGACGTCGACGGAGGAGCAGGTGGCGCGGCTGG
Internal bar code:TATAGGGATCCTTGGTTATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:467
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTCAGCTCCTCTAGTTT
Suggested primer 2:ATTCTTCGTGTGGGTGCCAT