Insertion junction: CLIP2.021064_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021064
Chromosome:chromosome 10
Location:5049711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454900 PDE29 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGAATCCAGCCCGCAGATGCCCACAGGAGCCTCCGCGCGGGCCTG
Internal bar code:GGAAATTTATTATTTGCATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2225
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGTCGAGGTCACGGTGA
Suggested primer 2:TACCAGACACACACAGACGC