Insertion junction: CLIP2.021068_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021068
Chromosome:chromosome 6
Location:8730506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310601 TNP19 putative transposase; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACCGCAGCCTGGCGGAACTTTGGGGCCTGACGCCCGGCCAGCTGGCA
Internal bar code:CTTATAGCTTGACGTCGATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2926
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGCTTGCTGATGACGGA
Suggested primer 2:CAAGTACAGCCACGACCTGT