Insertion junction: CLIP2.021074_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021074
Chromosome:chromosome 3
Location:2685472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160900 (1 of 1) PF07714//PF12796//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTTGTAACACACCTCCAGCAGGTCGTAGACCTCGGTGTGGTCGGCT
Internal bar code:TTCCTAGCAGTAATTGCTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:226
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGACGCGTCGTTACCGAT
Suggested primer 2:CACACAACAGCCAACAGACG