Insertion junction: CLIP2.021079_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021079
Chromosome:chromosome 7
Location:1258975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321900 (1 of 6) 3.1.26.11 - Ribonuclease Z / tRNase Z 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTTGGAGAGCAGGGGGTGCATGTTTGGATGGAAAGTGAGTTGCGGCTG
Internal bar code:GTGGCTTCTAGGGGCGTCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3090
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGTCAGGGTTCGTTCAG
Suggested primer 2:TCCATCTTGTGTGTGGCTCC