Insertion junction: CLIP2.021086_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021086
Chromosome:chromosome 9
Location:1181036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401050 (1 of 12) 2.7.11.18 - [Myosin light-chain] kinase / Smooth-muscle-myosin-light-chain kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCCACGTCCTCTTGCATTGTCCCCCTCCGTTCTCATGCCTCTGGTTT
Internal bar code:AACTTCGGTGTTGTCTCACCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1736
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTCGTCAAAGTCCTTCC
Suggested primer 2:CAACCCCTCCATGACCACTC