Insertion junction: CLIP2.021088_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021088
Chromosome:chromosome 12
Location:2782612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503950 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCTCAAACAGGTGGGTGCCTACGTACCGGGAAGTGGTCCGCGAGAAT
Internal bar code:CGGCACTTACCCACTTCTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:477
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTACCTGGTGTTCACACT
Suggested primer 2:CGATCTGGACGATACGCACA