Insertion junction: CLIP2.021095_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021095
Chromosome:chromosome 9
Location:2885361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801026 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGGCAGGCTACTCCAGTCCCAAAACAAACCATTGCCAACCCAACAA
Internal bar code:ATGCGATTCATCCTGGTTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:30.4348
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGCGTGTGTGTAC
Suggested primer 2:CAAACACCATGAGCTTCGCC