Insertion junction: CLIP2.021099_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021099
Chromosome:chromosome 2
Location:6536259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389050 CNX5,MAW4 (1 of 2) PTHR16861//PTHR16861:SF4 - GLYCOPROTEIN 38 // PODOPLANIN; Membrane-associated hydroxyproline-rich glycoprotein 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTTATCATCGGCGTCATCCGTAGAGAAAAACACAAAGCCTGTTAGGG
Internal bar code:AGCAGACGATACCCGACATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGGCTTGTGACCTACT
Suggested primer 2:GCGACGGTTCAGGGATGTTA