Insertion junction: CLIP2.021103_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021103
Chromosome:chromosome 11
Location:2071451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467756 MMP5 Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGTCCTACCCGGCGGCTACTTCACGGCTCTCAACGCACAAGGCAGCA
Internal bar code:CGGCTCTGTCACCATCCATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTCCCAAGTCGGTA
Suggested primer 2:ATTGCACAACGTAGGCCAGA