Insertion junction: CLIP2.021116_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021116
Chromosome:chromosome 12
Location:1297394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489450 (1 of 2) IPR017993 - Atrophin-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGATGCCGGCGACGCCTGGGTCAGGTCGCACACGACCACGAGCGGC
Internal bar code:TTTATCTGGGGTTTTATCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3277
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTATACGCGGGCATGTCA
Suggested primer 2:CCTTCGCCATCCTCATCCTC