Insertion junction: CLIP2.021122_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021122
Chromosome:chromosome 2
Location:226878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800153 intron
Cre02.g800155 3'UTR
lncRNA_TCONS_00054465 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACGGCTATGTTGTGGCGTTTAATGTACATGGCGCTGAGTTGTGGGTT
Internal bar code:AAATAAACGGGTGCGTATACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5514
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:126
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:126

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGCTGTTGATTGCGGG
Suggested primer 2:CATGACCACATCCCCAAGCT