Insertion junction: CLIP2.021122_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021122
Chromosome:chromosome 2
Location:921454
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g079100 XPA1 DNA repair protein; (1 of 1) K10847 - DNA-repair protein complementing XP-A cells (XPA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGCCGCCGCCGCCTCCACGCCCTGCTGGCACGCAGTGGAGCTACTGG
Internal bar code:GTATGGTGGGTTACACTGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGCACACAACGTCAAAT
Suggested primer 2:CCACACACCAACTCGCTTTG