Insertion junction: CLIP2.021123_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021123
Chromosome:chromosome 6
Location:5793070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTTTTATAGGGCACAACTGGATGGAAAGATTACTGTTACAGGCCTGC
Internal bar code:GTAGGTCGTGAAATATAGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3541
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGAAAATGCTGTCGGGT
Suggested primer 2:TGCACAGAAGCTCCTGAAGG