Insertion junction: CLIP2.021123_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021123
Chromosome:chromosome 6
Location:5793072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGACGGACCTGCTGGTGCTGGGCAACGCGGTTGCTGCCCCTCGGCCGC
Internal bar code:GTAGGTCGTGAAATATAGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1693
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACAGAAGCTCCTGAAGG
Suggested primer 2:TAGCGAAAATGCTGTCGGGT