Insertion junction: CLIP2.021127_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021127
Chromosome:chromosome 1
Location:1596038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008650 CDK1 Cyclin-dependent kinase; (1 of 12) 2.7.11.22//2.7.11.23 - Cyclin-dependent kinase / Cdk-activating protein kinase // [RNA-polymerase]-subunit kinase / CTD kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCAGCAGCAGCAGGGGCAGCGGCAGAAGCCGCAGCCTCAGCCGCTGGT
Internal bar code:GTCATGATCTAACGGTATTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:667
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TATACGCTGCATCGTGGGTC
Suggested primer 2:AGCCTCCTGACACAAGCATC