Insertion junction: CLIP2.021132_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021132
Chromosome:chromosome 14
Location:1721248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618979 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR
Cre14.g619000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGGACGAGCGGTGTAGCGGCATGGCTGTGTGGCTTGTGACCCGGAG
Internal bar code:GGCACGCTGTGTACAGCGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:6076
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGTGGCATTGCGTTGA
Suggested primer 2:AATGCTCACGCCCTTGATGA