Insertion junction: CLIP2.021136_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021136
Chromosome:chromosome 1
Location:1441951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007651 PUS10 (1 of 1) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase; RNA pseudouridine synthase 3'UTR
Cre01.g007700 (1 of 1) 3.4.11.1//3.4.11.5 - Leucyl aminopeptidase / Peptidase S // Prolyl aminopeptidase / Proline iminopeptidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTAAGCAGATGGCGGAAGCAGGCGGAGGCCGCAGGCGGAGGCCGCAGG
Internal bar code:TAAGCTTAAGGAGGGGTTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1276
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTGGTTGTTGTGAGCGC
Suggested primer 2:CTCAGGCAAAGTCGGTGAGT