Insertion junction: CLIP2.021144_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021144
Chromosome:chromosome 11
Location:1332860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467706 (1 of 1) PTHR10625//PTHR10625:SF117 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAAGCAGAAGCCCTGGGCGCGCTCGCACTCGGCGTGGTGCCCCGGCG
Internal bar code:TGTTTAAAGCTGTACACGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:373
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCCATGCACACTGCTA
Suggested primer 2:GGATGTCCCAATCCAGCACA