Insertion junction: CLIP2.021151_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021151
Chromosome:chromosome 10
Location:1519978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428720 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCACTTGGATTTGGATTTGGATTGGCTCGGCCGTGAGCAGCTGTGGA
Internal bar code:GTAGAGTGTGAGGCACTCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2941
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AATACCAGGAAGCTGCGGTC
Suggested primer 2:AGCACGAGATCTTGTTGGGG